CDS

Accession Number TCMCG006C97554
gbkey CDS
Protein Id XP_013671381.2
Location complement(join(58554330..58554398,58554477..58554541,58554614..58554692,58554775..58554904,58554996..58555078,58555174..58555261,58555349..58555421,58555515..58555569,58555643..58555695,58555776..58556029,58556258..58556370))
Gene LOC106375912
GeneID 106375912
Organism Brassica napus

Protein

Length 353aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013815927.2
Definition shikimate kinase 1, chloroplastic-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category F
Description shikimate kinase
KEGG_TC -
KEGG_Module M00022        [VIEW IN KEGG]
KEGG_Reaction R02412        [VIEW IN KEGG]
KEGG_rclass RC00002        [VIEW IN KEGG]
RC00078        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00891        [VIEW IN KEGG]
EC 2.7.1.71        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00400        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00400        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000287        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008652        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009072        [VIEW IN EMBL-EBI]
GO:0009073        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATCTTTTATATGTTTTTGTTTCGGAAAAGTCTCATTCTTATTTCCCTTCCGTTACTCAATTTCATTTGTATAATCATTTTATTCATAGAAAGCTCGAATTTTCTGACTTGGGATTTTGAATACTTTGTAATAAGTGTTTTGCATATGGAAGGAGCTATTGCTCAGAGGGTTCAGTACCCAACATGGGTTGATTGCAGAAAGTTTGAGGGGAAGCCGCTTGGATCATTGCGGTATTCTCAGCGAGTTAAGGAAGAGAAAAGGTTCAGAGGTCTTGTTGCTTTGGCTCATTTGCAACCTGACAGAAGATATGATCAACGGAGATCGGTTTCTTCAGAGGTTTCATGTTCTGACAACAACTCTTCAGTATTGTTGGAGGCGGGAAGAGTTCATCCATTTGATAAAGATCTAATCCTTAAGAGAAAAGCAGAAGAGGTTATACCGTATTTGAATGGACGGTCTATGTACCTTGTTGGGATGATGGGTTCTGGGAAAACAACCGTTGGGAAGTTAATGTCTAAAGTGCTCGGTTATTCCTTCTTTGACTGTGACACTCTGATTGAGCAGGCGATGAATGGAGCTTCTGTGGCAGAGATATTCGAGCATCATGGAGAGAGTTTCTTTAGAGGAAAGGAGACTGATGCACTAAAGAAGCTCTCTTCAATGTATCACGTTGTTGTTTCAACTGGTGGAGGTGCAGTTATAAGACCTATTAACTGGAAATATATGAACAAAGGAGTCAGCATTTGGCTAGATGTGCCTCTTGAAGCCTTAGCACATAGAATCGCTGCTGTTGGAACTGATTCGCGGCCACTGTTACACGATGAATCAGGAGATGCATACACTGTGGCTTTCAAGCGTCTTTCAACGATTTGGGATGAGCGCGGTGAAGCATACACAAACGCAAATGCTAGAGTCTCCTTAGAAAATATTGCAGTCAAGCTTGGATACAAAGACGTCTCAGATCTCACACCAACTGAAATCGCCATTGAGGCCTTTGAGCAAGTTCAGAGCTTTCTAGAAAAAGAAGAAACAGTGGAGATCCCCGACGGCGACCTCTAG
Protein:  
MIFYMFLFRKSLILISLPLLNFICIIILFIESSNFLTWDFEYFVISVLHMEGAIAQRVQYPTWVDCRKFEGKPLGSLRYSQRVKEEKRFRGLVALAHLQPDRRYDQRRSVSSEVSCSDNNSSVLLEAGRVHPFDKDLILKRKAEEVIPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYSFFDCDTLIEQAMNGASVAEIFEHHGESFFRGKETDALKKLSSMYHVVVSTGGGAVIRPINWKYMNKGVSIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYTVAFKRLSTIWDERGEAYTNANARVSLENIAVKLGYKDVSDLTPTEIAIEAFEQVQSFLEKEETVEIPDGDL